Skip to content
@lcrawlab

Crawford Lab

A group of computationally-minded researchers developing novel methods to address complex problems in genetics, cancer genomics, and radiomics.

Pinned Loading

  1. BANNs BANNs Public

    Code and simulations using biologically annotated neural networks

    HTML 21 3

  2. i-LDSC i-LDSC Public

    Code and simulations using interaction-LD score regression

    Python 13 1

  3. mvMAPIT mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    R 11 1

  4. callback callback Public

    Calibrated clustering via knockoffs for single-cell genomics

    R 10

  5. SINATRA SINATRA Public

    A statistical framework for feature selection and association mapping with 3D shapes

    R 8 4

  6. SINATRA-Pro SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    Python 4

Repositories

Showing 10 of 18 repositories
  • mmer Public

    A computationally efficient method which detects statistical epistasis in complex traits.

    lcrawlab/mmer’s past year of commit activity
    C++ 0 0 0 0 Updated Dec 15, 2024
  • Geneformer Public
    lcrawlab/Geneformer’s past year of commit activity
    Python 0 0 0 0 Updated Dec 14, 2024
  • cancer-drug-synergy-prediction Public

    Github repo for cancer drug synergy prediction work

    lcrawlab/cancer-drug-synergy-prediction’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Dec 10, 2024
  • recall Public

    Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing

    lcrawlab/recall’s past year of commit activity
    R 0 0 0 0 Updated Nov 19, 2024
  • mvMAPIT Public

    The multivariate MArginal ePIstasis Test

    lcrawlab/mvMAPIT’s past year of commit activity
    R 11 GPL-3.0 1 0 0 Updated Oct 21, 2024
  • callback Public

    Calibrated clustering via knockoffs for single-cell genomics

    lcrawlab/callback’s past year of commit activity
    R 10 0 0 0 Updated Jul 11, 2024
  • i-LDSC Public

    Code and simulations using interaction-LD score regression

    lcrawlab/i-LDSC’s past year of commit activity
    Python 13 GPL-3.0 1 1 0 Updated Jul 2, 2024
  • multio-viz Public

    A platform for the interactive assessment of gene regulatory networks

    lcrawlab/multio-viz’s past year of commit activity
    R 3 GPL-3.0 0 0 0 Updated May 10, 2024
  • SINATRA-Pro Public

    Topological data analytic approach for discovering biophysical signatures in protein dynamics

    lcrawlab/SINATRA-Pro’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Mar 14, 2024
  • callbackreproducibility Public
    lcrawlab/callbackreproducibility’s past year of commit activity
    R 0 0 0 0 Updated Mar 13, 2024
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Most used topics

Loading…