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@loosolab

Looso bioinformatics lab

Group of bioinformatics at the Max Planck Institute for Heart and Lung Research

Popular repositories Loading

  1. TOBIAS TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    Python 198 41

  2. scanpro scanpro Public

    A modular tool for proportion analysis in single-cell sequencing data

    Jupyter Notebook 16 1

  3. UROPA UROPA Public

    Universal RObust Peak Annotator

    Python 15 6

  4. i2dash i2dash Public

    i2dash: interactive and iterative dashboards.

    R 10 3

  5. TF-COMB TF-COMB Public

    Transcription Factor Co-Occurrence using Market Basket analysis

    Python 10 1

  6. cardiac-progenitors cardiac-progenitors Public

    Single cell RNA-seq and ATAC seq analysis of cardiac progenitor cell transition states and lineage settlement

    R 8 3

Repositories

Showing 10 of 27 repositories
  • loosolab/FRED_whitelists’s past year of commit activity
    Python 0 0 0 0 Updated Nov 21, 2024
  • SC-Framework Public

    A framework for single cell analysis

    loosolab/SC-Framework’s past year of commit activity
    Python 2 0 0 0 Updated Nov 20, 2024
  • loosolab/Code_Jin_et_al_2024_Atherosclerosis_PKN1’s past year of commit activity
    R 0 MIT 0 0 0 Updated Nov 18, 2024
  • denis Public

    framework for de novo motif generation on ATAC-seq

    loosolab/denis’s past year of commit activity
    Python 2 MIT 0 2 0 Updated Nov 12, 2024
  • loosolab/biodaten24-25-large_bulk_multiomics’s past year of commit activity
    2 0 0 0 Updated Nov 7, 2024
  • loosolab/Code_Li_et_al_2024_sEH_monocytes’s past year of commit activity
    R 0 MIT 0 0 0 Updated Aug 20, 2024
  • scanpro Public

    A modular tool for proportion analysis in single-cell sequencing data

    loosolab/scanpro’s past year of commit activity
    Jupyter Notebook 16 MIT 1 0 0 Updated Aug 1, 2024
  • TOBIAS Public

    Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

    loosolab/TOBIAS’s past year of commit activity
    Python 198 MIT 41 1 0 Updated Jul 15, 2024
  • loosolab/biodaten23-24-scATAC-clustering’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Feb 28, 2024
  • TF-COMB Public

    Transcription Factor Co-Occurrence using Market Basket analysis

    loosolab/TF-COMB’s past year of commit activity
    Python 10 MIT 1 14 0 Updated Jan 30, 2024

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