update hook revisions #1316
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| # NOTE: This workflow is overkill for most R packages | |
| # check-standard.yaml is likely a better choice | |
| # usethis::use_github_action("check-standard") will install it. | |
| # | |
| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | |
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}, ${{ matrix.config.installation_method }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| # macOS | |
| - {os: macOS-latest, r: 'release', installation_method: 'brew'} | |
| - {os: macOS-latest, r: 'release', installation_method: 'conda'} | |
| - {os: macOS-latest, r: 'release', installation_method: 'pip'} | |
| # Windows | |
| - {os: windows-latest, r: 'release', installation_method: 'pip'} | |
| - {os: windows-latest, r: 'release', installation_method: 'conda'} | |
| - {os: windows-latest, r: 'devel', installation_method: 'conda'} | |
| # Linux | |
| - {os: ubuntu-latest, r: 'release', installation_method: 'pip', use-public-rspm: true} | |
| - {os: ubuntu-latest, r: 'release', installation_method: 'conda', use-public-rspm: true} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| PRECOMMIT_INSTALLATION_METHOD: ${{ matrix.config.installation_method }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install system dependencies (brew) | |
| if: matrix.config.installation_method == 'brew' | |
| run: brew install pre-commit | |
| - name: Install system dependencies (pip, non-macOS) | |
| if: matrix.config.installation_method == 'pip' && matrix.config.os != 'macOS-latest' | |
| run: | | |
| pip3 install pre-commit --user | |
| - name: Install system dependencies (pip, macOS) | |
| if: matrix.config.installation_method == 'pip' && matrix.config.os == 'macOS-latest' | |
| run: | | |
| pip3 install pre-commit --user --break-system-packages | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| - name: Remove reticulate for other installation methods | |
| run: | | |
| # installation methods other than conda don't need reticulate | |
| if (Sys.getenv("PRECOMMIT_INSTALLATION_METHOD") != 'conda') { | |
| remove.packages('reticulate') | |
| } | |
| shell: Rscript {0} | |
| - name: Install system dependencies (conda) | |
| if: matrix.config.installation_method == 'conda' | |
| run: | | |
| reticulate::install_miniconda() | |
| shell: Rscript {0} | |
| - name: Session info | |
| run: | | |
| options(width = 100) | |
| pkgs <- installed.packages()[, "Package"] | |
| sessioninfo::session_info(pkgs, include_base = TRUE) | |
| shell: Rscript {0} | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_: false | |
| run: | | |
| options(crayon.enabled = TRUE) | |
| if (Sys.getenv("PRECOMMIT_INSTALLATION_METHOD") != 'conda') { | |
| Sys.setenv("_R_CHECK_FORCE_SUGGESTS_" = "False") | |
| } | |
| remotes::install_local() # circumvent https://github.com/r-lib/rcmdcheck/issues/136 | |
| install.packages("rcmdcheck") | |
| rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Show testthat output | |
| if: always() | |
| run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| - name: Don't use tar from old Rtools to store the cache | |
| if: ${{ runner.os == 'Windows' && startsWith(steps.install-r.outputs.installed-r-version, '3.6' ) }} | |
| shell: bash | |
| run: echo "C:/Program Files/Git/usr/bin" >> $GITHUB_PATH |