v1.3.1

What's Changed

• Breaking: Corrects setting in adaptiveMCMC handler which causes crashes by @henry-wallace-phys in #249
• breaking: Remove Legacy init by @KSkwarczynski in #241
• feat: Smarter CombineMCMCChains by @KSkwarczynski in #251
• tidy: Setters and Getters for updted Covariance CI by @KSkwarczynski in #254
• tidy: Step Scale Sanity chekc et. al. by @KSkwarczynski in #253
• tidy: Norm Param Verbose by @KSkwarczynski in #248
• feat: Flexible Violin Plotter by @KSkwarczynski in #250
• tidy: Janitorial work for SamplePDF by @KSkwarczynski in #252
• bugfix: TAxis get array fix for spline binning print by @EdAtkin in #255
• bugfix: Update treatment of getting Norm Params by @KSkwarczynski in #257
• tidy: Doxygen Credits by @KSkwarczynski in #256

Full Changelog: v1.3.0...v1.3.1

v1.3.0

What's Changed

• automatically set PYTHONPATH in setup.MaCh3.sh by @ewanwm in #155
• Override Settings by @KSkwarczynski in #156
• Sphinx documentation for python by @ewanwm in #158
• Linter by @KSkwarczynski in #159
• Save Covariance in MCMC File by @KSkwarczynski in #160
• Covariance Factory by @KSkwarczynski in #163
• Remove plotting configs from core by @ewanwm in #167
• Random Tidy by @KSkwarczynski in #166
• Meme bot test by @KSkwarczynski in #170
• Feature osc class magic by @EdAtkin in #161
• fix to work with other shells than bash by @nosektom in #173
• Python Interface for MaCh3 by @ewanwm in #176
• Re-add get1DVarHist back into samplePDFFDBase by @dbarrow257 in #172
• Auto generation python docs by @ewanwm in #178
• Upload docs to pages by @ewanwm in #179
• Fix gh-pages deployment by @ewanwm in #180
• Fix link in mainpage.md by @ewanwm in #181
• Tidy by @KSkwarczynski in #182
• Start From Previous Chain by @KSkwarczynski in #175
• Remove Garbage by @KSkwarczynski in #183
• CI Folder Fix by @KSkwarczynski in #185
• More Flexible Start FromPrevious by @KSkwarczynski in #184
• Remvoe Size... by @KSkwarczynski in #188
• Matrix Plotter by @KSkwarczynski in #187
• enforece use of new sample CI by @KSkwarczynski in #191
• Save CMakeStandard by @KSkwarczynski in #193
• Tidies up CMake, enables core libraries to build with -Wall -Wextra -… by @luketpickering in #190
• Feature tidy up by @EdAtkin in #189
• Random by @KSkwarczynski in #194
• adds -DMaCh3_WERROR_ENABLED=OFF options if you just can't even with GCC by @luketpickering in #195
• Fix CUDA compilation by @henry-wallace-phys in #197
• Random Fixes by @KSkwarczynski in #198
• Sample PDF Factory by @KSkwarczynski in #200
• Fix code scanning alert no. 2135: Multiplication result converted to larger type by @KSkwarczynski in #201
• Fix code scanning alert no. 2136: Multiplication result converted to larger type by @KSkwarczynski in #202
• More fixes to werror by @henry-wallace-phys in #204
• Caseinsentisitve param group by @KSkwarczynski in #203
• Random Tidy by @KSkwarczynski in #207
• MCMC Thinning by @KSkwarczynski in #206
• Correctly ignore C-style cast in CUDA header, short int->int to avoid… by @henry-wallace-phys in #209
• Say hello to new CUDA bot by @KSkwarczynski in #210
• pip install to CI/CD by @KSkwarczynski in #211
• Normalisation parameter kinetmatic cuts niceities by @tdealtry in #214
• Fix py ma ch3 pip install by @ewanwm in #208
• fix the links in sphinx docs by @ewanwm in #217
• Add Python CI by @ewanwm in #218
• MCMC Averaging by @KSkwarczynski in #212
• Tidy by @KSkwarczynski in #220
• Tidy Factory by @KSkwarczynski in #221
• Fix plotting by @KSkwarczynski in #223
• Feature/dbarrow257/osc prob by @dbarrow257 in #222
• Some Fixes by @KSkwarczynski in #226
• Feature Fast RHat by @mreh528 in #224
• Faster caching by @KSkwarczynski in #227
• More CI by @KSkwarczynski in #228
• Fix segfault by @KSkwarczynski in #229
• DEBUF->DEBUG by @henry-wallace-phys in #233
• WAIC by @KSkwarczynski in #230
• Feature core 1.2.0 by @EdAtkin in #235
• Random by @KSkwarczynski in #234
• Feature gpu compile options by @EdAtkin in #237
• Fix Tittle in LLH plot by @KSkwarczynski in #238
• feat: Bot which enforce correct tittle naming by @KSkwarczynski in #239
• bugfix: Now use M3::float_t type in more places, tidy: Removing duplicated Unity values by @EdAtkin in #240
• tidy: Bump actions/checkout from 3 to 4 in /.github/workflows by @dependabot in #242
• bugfix: Fix flag proapgation to NuOsc by @KSkwarczynski in #244
• tidy: Simplfy Triangle Plot and more by @KSkwarczynski in #243
• feat: Print which settigns are different when merging chians by @KSkwarczynski in #246

New Contributors

• @nosektom made their first contribution in #173
• @dbarrow257 made their first contribution in #172
• @luketpickering made their first contribution in #190
• @mreh528 made their first contribution in #224

Full Changelog: v1.1.8...v1.3.0

v1.2.0

What's Changed

• automatically set PYTHONPATH in setup.MaCh3.sh by @ewanwm in #155
• Override Settings by @KSkwarczynski in #156
• Sphinx documentation for python by @ewanwm in #158
• Linter by @KSkwarczynski in #159
• Save Covariance in MCMC File by @KSkwarczynski in #160
• Covariance Factory by @KSkwarczynski in #163
• Remove plotting configs from core by @ewanwm in #167
• Random Tidy by @KSkwarczynski in #166
• Meme bot test by @KSkwarczynski in #170
• Feature osc class magic by @EdAtkin in #161
• fix to work with other shells than bash by @nosektom in #173
• Python Interface for MaCh3 by @ewanwm in #176
• Re-add get1DVarHist back into samplePDFFDBase by @dbarrow257 in #172
• Auto generation python docs by @ewanwm in #178
• Upload docs to pages by @ewanwm in #179
• Fix gh-pages deployment by @ewanwm in #180
• Fix link in mainpage.md by @ewanwm in #181
• Tidy by @KSkwarczynski in #182
• Start From Previous Chain by @KSkwarczynski in #175
• Remove Garbage by @KSkwarczynski in #183
• CI Folder Fix by @KSkwarczynski in #185
• More Flexible Start FromPrevious by @KSkwarczynski in #184
• Remvoe Size... by @KSkwarczynski in #188

New Contributors

• @nosektom made their first contribution in #173
• @dbarrow257 made their first contribution in #172

Full Changelog: v1.1.8...v1.2.0

v1.2.0_alpha

What's Changed

• Update Python Interface by @KSkwarczynski in #100
• CI Validations by @KSkwarczynski in #99
• Bump peaceiris/actions-gh-pages from 3 to 4 in /.github/workflows by @dependabot in #103
• Bump actions/checkout from 3 to 4 in /.github/workflows by @dependabot in #104
• Remove ThrowParms by @KSkwarczynski in #98
• More Scalable Cov Xsec by @KSkwarczynski in #106
• Paramter Evolution .gif by @KSkwarczynski in #102
• Bot Tagging Tutorial/Validations whenever Human Tags MaCh3 by @KSkwarczynski in #108
• Doxygen bibliography by @KSkwarczynski in #110
• Bump actions/labeler from 3 to 5 in /.github/workflows by @dependabot in #111
• Feature tidy by @KSkwarczynski in #113
• TF1 Interpolation is back by @KSkwarczynski in #92
• Random Fixes by @KSkwarczynski in #116
• Yaml for Osc Cov by @KSkwarczynski in #112
• Update README.md by @DomLangridge in #118
• Minor syntax error fixes & removed some print statements by @DomLangridge in #119
• Added GetNp to TF1 in SplineStructs by @DomLangridge in #121
• Changes to CI after I change valaitions into tutorial by @KSkwarczynski in #122
• Less hardcoded GPU splines by @KSkwarczynski in #124
• SIMD for FD spline weight calculation by @yash-quark in #123
• Parameter Group by @KSkwarczynski in #125
• Spline GPU into proper class by @KSkwarczynski in #126
• Debug CI by @KSkwarczynski in #127
• Easier Flat Spline Monolith by @KSkwarczynski in #128
• Tidy Cov handlers by @KSkwarczynski in #129
• MCMC Diagnostic To CI by @KSkwarczynski in #130
• Nu MCMC CI by @KSkwarczynski in #132
• Tidy CovXsec by @KSkwarczynski in #133
• More MCMC Diag to CI by @KSkwarczynski in #134
• Bump actions/stale from 5 to 9 in /.github/workflows by @dependabot in #135
• Fix seg fault by @KSkwarczynski in #136
• Testing codoweners by @KSkwarczynski in #137
• Smarter CPM by @KSkwarczynski in #139
• Feature plotting mcmc by @ewanwm in #138
• Newsletter from bot by @KSkwarczynski in #151
• Bump actions/checkout from 3 to 4 in /.github/workflows by @dependabot in #152
• Test by @KSkwarczynski in #153
• save the 1d posteriors in MCMCProcessor by @ewanwm in #154
• automatically set PYTHONPATH in setup.MaCh3.sh by @ewanwm in #155
• Override Settings by @KSkwarczynski in #156
• Sphinx documentation for python by @ewanwm in #158
• Linter by @KSkwarczynski in #159
• Save Covariance in MCMC File by @KSkwarczynski in #160
• Covariance Factory by @KSkwarczynski in #163
• Remove plotting configs from core by @ewanwm in #167
• Random Tidy by @KSkwarczynski in #166
• Meme bot test by @KSkwarczynski in #170
• Feature osc class magic by @EdAtkin in #161
• fix to work with other shells than bash by @nosektom in #173
• Python Interface for MaCh3 by @ewanwm in #176
• Re-add get1DVarHist back into samplePDFFDBase by @dbarrow257 in #172
• Auto generation python docs by @ewanwm in #178
• Upload docs to pages by @ewanwm in #179
• Fix gh-pages deployment by @ewanwm in #180
• Fix link in mainpage.md by @ewanwm in #181
• Tidy by @KSkwarczynski in #182
• Start From Previous Chain by @KSkwarczynski in #175
• Remove Garbage by @KSkwarczynski in #183
• CI Folder Fix by @KSkwarczynski in #185
• More Flexible Start FromPrevious by @KSkwarczynski in #184
• Remvoe Size... by @KSkwarczynski in #188
• Matrix Plotter by @KSkwarczynski in #187
• enforece use of new sample CI by @KSkwarczynski in #191
• Save CMakeStandard by @KSkwarczynski in #193

New Contributors

• @dependabot made their first contribution in #103
• @DomLangridge made their first contribution in #118
• @yash-quark made their first contribution in #123
• @nosektom made their first contribution in #173
• @dbarrow257 made their first contribution in #172

Full Changelog: v1.1.0...v1.2.0_alpha

v1.1.0

MaCh3 core v1.1.0, a more complete stable release for both the Far and Near detector code.

There are various improvements with major changes being:

• MCMC diagnostics
• Custom error handling and logger
• MaCh3 Modes from YAML config
• Flexible sample binning for the FD
• Can now run with no splined systematics loaded

And more minor changes being:

• Fixed PCA
• Improved GPU cmake
• Flexible plotting: add power spectra, Violin plots,
• New handler: Adaptive MCMC Handler, PCA
• Drag race to compare speed of different methods
• Factory for fitting methods