Add wdl linter github action #3
Workflow file for this run
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| name: WDL validation CI | |
| on: | |
| pull_request: | |
| branches: master | |
| jobs: | |
| run-miniwdl: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.8' # specify the Python version you need | |
| - name: Install JAWS | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --target /global/cfs/cdirs/m3408/users/nmdcda jaws-client --index-url https://code.jgi.doe.gov/api/v4/projects/312/packages/pypi/simple | |
| - name: Validate WDL | |
| run: | | |
| # Add the commands to run your MiniWDL workflow | |
| jaws validate mbin_nmdc.wdl | |