3 more

.docs/Notebooks/groundwater2023_watershed_example.py

@@ -25,10 +25,12 @@
 import pathlib as pl
 import sys
 
+import git
 import matplotlib as mpl
 import matplotlib.gridspec as gridspec
 import matplotlib.pyplot as plt
 import numpy as np
+import pooch
 import shapely
 import yaml
 from shapely.geometry import LineString, Polygon
@@ -106,10 +108,25 @@ def set_idomain(grid, boundary):
     grid.idomain = idomain
 
 
-geometries = yaml.safe_load(
-    open(pl.Path("../../examples/data/groundwater2023/geometries.yml"))
+# Check if we are in the repository and define the data path.
+
+try:
+    root = pl.Path(git.Repo(".", search_parent_directories=True).working_dir)
+except:
+    root = None
+
+data_path = root / "examples" / "data" if root else pl.Path.cwd()
+folder_name = "groundwater2023"
+fname = "geometries.yml"
+pooch.retrieve(
+    url=f"https://github.com/modflowpy/flopy/raw/develop/examples/data/mf6//{fname}",
+    fname=fname,
+    path=data_path / folder_name,
+    known_hash=None,
 )
 
+geometries = yaml.safe_load(open(data_path / folder_name / fname))
+
 # basic figure size
 figwidth = 180  # 90 # mm
 figwidth = figwidth / 10 / 2.54  # inches
@@ -161,7 +178,13 @@ def set_idomain(grid, boundary):
     os.mkdir(temp_path)
 
 # Load the fine topography that will be sampled
-ascii_file = pl.Path("../../examples/data/geospatial/fine_topo.asc")
+fname = "fine_topo.asc"
+ascii_file = pooch.retrieve(
+    url=f"https://github.com/modflowpy/flopy/raw/develop/examples/data/geospatial/{fname}",
+    fname=fname,
+    path=data_path / "geospatial",
+    known_hash=None,
+)
 fine_topo = flopy.utils.Raster.load(ascii_file)
 
 # Define the problem size and extents

.docs/Notebooks/load_swr_binary_data_example.py

@@ -20,10 +20,13 @@
 
 import os
 import sys
+from pathlib import Path
 
+import git
 import matplotlib as mpl
 import matplotlib.pyplot as plt
 import numpy as np
+import pooch
 
 # +
 from IPython.display import Image
@@ -35,9 +38,37 @@
 print(f"matplotlib version: {mpl.__version__}")
 print(f"flopy version: {flopy.__version__}")
 
+# Check if we are in the repository and define the data path.
+
+try:
+    root = Path(git.Repo(".", search_parent_directories=True).working_dir)
+except:
+    root = None
+
+data_path = root / "examples" / "data" if root else Path.cwd()
+folder_name = "swr_test"
+
 # +
 # Set the paths
-datapth = os.path.join("..", "..", "examples", "data", "swr_test")
+datapth = data_path / folder_name
+
+file_names = [
+    "SWR004.dis.ref",
+    "SWR004.flow",
+    "SWR004.obs",
+    "SWR004.stg",
+    "SWR004.str",
+    "SWR004.vel",
+    "swr005.qaq",
+    "swr005.str",
+]
+for fname in file_names:
+    pooch.retrieve(
+        url=f"https://github.com/modflowpy/flopy/raw/develop/examples/data/{folder_name}/{fname}",
+        fname=fname,
+        path=datapth,
+        known_hash=None,
+    )
 
 # SWR Process binary files
 files = ("SWR004.obs", "SWR004.vel", "SWR004.str", "SWR004.stg", "SWR004.flow")

.docs/Notebooks/mf6_complex_model_example.py

@@ -21,15 +21,18 @@
 # ### Setup the Notebook Environment
 
 import os
+import sys
 
 # +
-import sys
+from pathlib import Path
 from pprint import pformat
 from tempfile import TemporaryDirectory
 
+import git
 import matplotlib as mpl
 import matplotlib.pyplot as plt
 import numpy as np
+import pooch
 
 import flopy
 
@@ -39,13 +42,63 @@
 print(f"flopy version: {flopy.__version__}")
 # -
 
+
+# Check if we are in the repository and define the data path.
+
+try:
+    root = Path(git.Repo(".", search_parent_directories=True).working_dir)
+except:
+    root = None
+
+data_path = root / "examples" / "data" if root else Path.cwd()
+sim_name = "test005_advgw_tidal"
+file_names = [
+    "AdvGW_tidal.dis",
+    "AdvGW_tidal.evt",
+    "AdvGW_tidal.ghb",
+    "AdvGW_tidal.ghb.obs",
+    "AdvGW_tidal.head.cont.opncls",
+    "AdvGW_tidal.ic",
+    "AdvGW_tidal.nam",
+    "AdvGW_tidal.npf",
+    "AdvGW_tidal.obs",
+    "AdvGW_tidal.oc",
+    "AdvGW_tidal.riv",
+    "AdvGW_tidal.riv.obs",
+    "AdvGW_tidal.riv.single.opncls",
+    "AdvGW_tidal.sto",
+    "AdvGW_tidal.wel",
+    "AdvGW_tidal_1.rch",
+    "AdvGW_tidal_2.rch",
+    "AdvGW_tidal_3.rch",
+    "advgw_tidal.dis.grb",
+    "mfsim.nam",
+    "model.ims",
+    "recharge_rates.ts",
+    "recharge_rates_1.ts",
+    "recharge_rates_2.ts",
+    "recharge_rates_3.ts",
+    "river_stages.ts",
+    "simulation.tdis",
+    "tides.ts",
+    "tides.txt",
+    "well_rates.ts",
+]
+for fname in file_names:
+    pooch.retrieve(
+        url=f"https://github.com/modflowpy/flopy/raw/develop/examples/data/mf6/{sim_name}/{fname}",
+        fname=fname,
+        path=data_path / "mf6" / sim_name,
+        known_hash=None,
+    )
+
 # For this example, we will set up a temporary workspace.
 # Model input files and output files will reside here.
 temp_dir = TemporaryDirectory()
 model_name = "advgw_tidal"
 workspace = os.path.join(temp_dir.name, model_name)
 
-data_pth = os.path.join("..", "..", "examples", "data", "mf6", "test005_advgw_tidal")
+data_pth = data_path / "mf6" / sim_name
 assert os.path.isdir(data_pth)
 
 # +