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  1. K2Taxonomer K2Taxonomer Public

    A tool for the multi-resolution characterization of molecular taxonomies in bulk and single-cell omics data

    R 4 1

  2. CaDrA CaDrA Public

    Candidate Drivers Analysis: Multi-Omic Search for Candidate Drivers of Functional Signatures

    R 24 1

  3. iEDGE iEDGE Public

    integrative analysis of (epi-)DNA and gene expression data for the identification of candidate cancer drivers

    R 6 1

  4. hypeR hypeR Public

    An R Package for Geneset Enrichment Workflows

    R 76 11

  5. pipeliner pipeliner Public

    A flexible Nextflow-based framework for the definition of sequencing data processing pipelines

    Nextflow 44 13

  6. ppi-context ppi-context Public

    Contextualization of protein-protein interaction databases by cell line

    Python 5

Repositories

Showing 10 of 38 repositories
  • K2Taxonomer Public

    A tool for the multi-resolution characterization of molecular taxonomies in bulk and single-cell omics data

    montilab/K2Taxonomer’s past year of commit activity
    R 4 GPL-3.0 1 3 0 Updated Dec 19, 2024
  • OmicSignature Public
    montilab/OmicSignature’s past year of commit activity
    R 3 GPL-3.0 0 1 0 Updated Dec 18, 2024
  • CaDrA Public

    Candidate Drivers Analysis: Multi-Omic Search for Candidate Drivers of Functional Signatures

    montilab/CaDrA’s past year of commit activity
    R 24 GPL-3.0 1 8 0 Updated Sep 21, 2024
  • montilab/LSD1_Antitumor_Immunity’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Sep 17, 2024
  • BS831 Public

    Course Materials for Genomics Data Mining

    montilab/BS831’s past year of commit activity
    HTML 22 GPL-3.0 9 9 1 Updated Sep 2, 2024
  • hypeR Public

    An R Package for Geneset Enrichment Workflows

    montilab/hypeR’s past year of commit activity
    R 76 GPL-3.0 11 9 0 Updated May 29, 2024
  • nf-gwas-pipeline Public

    A Nextflow Genome-Wide Association Study (GWAS) Pipeline

    montilab/nf-gwas-pipeline’s past year of commit activity
    R 31 GPL-3.0 20 1 0 Updated May 7, 2024
  • evalGSVAsig Public

    Evaluate genes driving signature

    montilab/evalGSVAsig’s past year of commit activity
    R 1 GPL-3.0 1 2 0 Updated Apr 18, 2024
  • yQTLpipeline Public
    montilab/yQTLpipeline’s past year of commit activity
    R 1 GPL-3.0 0 1 0 Updated Apr 12, 2024
  • pipeliner-2 Public

    Pipeliner upgraded for Nextflow DSL2 modules

    montilab/pipeliner-2’s past year of commit activity
    Nextflow 3 GPL-3.0 1 1 0 Updated Apr 9, 2024

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