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CSBD

Center for Systems Biology Dresden

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  1. structured_N2V structured_N2V Public

    Code for StructN2V method and experiments

    Python 23 3

  2. phasenet phasenet Public

    Fast and accurate aberration estimation from 3D bead images using convolutional neural networks

    Jupyter Notebook 18 5

  3. napari-kics napari-kics Public

    A plugin to estimate chromosome sizes from karyotype images.

    Python 6

  4. image_overlay_animation image_overlay_animation Public

    4 2

  5. devseg2 devseg2 Public

    Detecting densely packed nuclei in 3D with deep nets

    Python 3 1

  6. detsegtra detsegtra Public

    numpy utils for cell and blob segmentation and analysis

    Python 2

Repositories

Showing 10 of 13 repositories
  • devseg2 Public

    Detecting densely packed nuclei in 3D with deep nets

    mpicbg-csbd/devseg2’s past year of commit activity
    Python 3 1 0 0 Updated Dec 20, 2022
  • detsegtra Public

    numpy utils for cell and blob segmentation and analysis

    mpicbg-csbd/detsegtra’s past year of commit activity
    Python 2 0 0 0 Updated Dec 17, 2022
  • napari-kics Public

    A plugin to estimate chromosome sizes from karyotype images.

    mpicbg-csbd/napari-kics’s past year of commit activity
    Python 6 BSD-3-Clause 0 0 0 Updated Jun 13, 2022
  • phasenet Public

    Fast and accurate aberration estimation from 3D bead images using convolutional neural networks

    mpicbg-csbd/phasenet’s past year of commit activity
    Jupyter Notebook 18 BSD-3-Clause 5 0 0 Updated Feb 16, 2022
  • unet-smfish-seg Public

    models for pixelwise classification of zebrafish cryosection cell membranes

    mpicbg-csbd/unet-smfish-seg’s past year of commit activity
    Python 1 0 0 0 Updated Jan 31, 2022
  • structured_N2V Public

    Code for StructN2V method and experiments

    mpicbg-csbd/structured_N2V’s past year of commit activity
    Python 23 BSD-3-Clause 3 1 0 Updated Jan 22, 2022
  • micro-manager Public Forked from nicost/micro-manager

    Microscope control and image acquisition integrated with ImageJ.

    mpicbg-csbd/micro-manager’s past year of commit activity
    C++ 0 231 0 0 Updated Jan 28, 2020
  • clij-docs Public Forked from clij/clij-docs

    Online documentation and reference for CLIJ

    mpicbg-csbd/clij-docs’s past year of commit activity
    Java 1 BSD-3-Clause 7 0 0 Updated Apr 22, 2019
  • image_overlay_animation Public
    mpicbg-csbd/image_overlay_animation’s past year of commit activity
    4 2 0 0 Updated Apr 13, 2019
  • clearopenspim Public
    mpicbg-csbd/clearopenspim’s past year of commit activity
    Java 2 1 0 0 Updated Mar 29, 2019
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