The scripts in this repository reproduce the experiments of:
H. Christian M. Holme, Sebastian Rosenzweig, Frank Ong, Robin N. Wilke, Michael Lustig, Martin Uecker. ENLIVE: An Efficient Nonlinear Method for Calibrationless and Robust Parallel Imaging. Scientific Reports 9:3034 (2019)
The reconstruction uses an adapted version of the
Berkeley Advanced Reconstruction Toolbox (BART).
To generate the figures, the cfl2png command of
view is used.
Finally, the resulting .png's are arranged using
imagemagick (tested with ImageMagick 6.9.7-4).
There is a top-level bash-script called run.sh which should automatically generate all figures and place them in the output directory. The necessary versions of bart and view are downloaded and compiled automatically.
Please note that total runtime of all scripts is likely to exceed 12 hours. However, more than 95% of that time is spent on the SAKE reconstructions for Figures 8 and 9.
Try it in your browser:
If you need further help to run these scripts, I am happy to help you. Contact information is provided in both the paper and the preprint above.
August 30, 2017 - Christian Holme
