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Pre-processing and minor fixes
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@marcus1487 marcus1487 released this 21 Dec 22:42
· 71 commits to master since this release
1.1.1
c7c08a7

The major update in this release is the addition of the annotate_raw_with_fastqs command. This command adds the basecalled sequence information from a set of FASTQs to the corresponding set of FAST5 raw read data files. This allows users to avoid the creation and storage of large basecalled FAST5 files containing Events information.

The documentation has also been updated including more complete and concise API documentation.

Additional minor bug fixes:

  • Minor bug in sam parser from bwa mem mappings (thanks to @rasto2211 for the bug report)
  • Re-factored Tombo event access (thanks to @JohnUrban for the bug report)
  • Fixed statistics only wiggle output (thanks to @JohnUrban for the bug report)
  • Fixed bug in genome sequence from reads extraction code (thanks to @JohnUrban for the bug report)
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