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Releases: nanshe-org/nanshe_workflow

v2.12.11

10 Mar 01:54
fb128ad
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  • Drop custom dask_config.yaml (for 2.x). #335

v2.12.10

05 Mar 05:34
e7a2c82
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  • Drop extra conda update from CI (for 2.x). #326
  • Use Dask's blockwise (for 2.x). #324
  • Use Dask's blockwise in library shift function (for 2.x). #328

v2.12.9

01 Mar 17:18
b7649ed
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  • Ingest list of TIFF files. #256
  • Use GZIP compression in ROI Traces plot (for 2.x). #290
  • Use context manager with mmap object (for 2.x). #293
  • Use Python 3.6.7 (for 2.x). #296
  • Join intermediate persist steps in registration (for 2.x). #298
  • Use Dask Array FFT interface directly (for 2.x). #300
  • Drop zlib import for ROI trace plot (for 2.x). #302
  • Catch OSError raised by dask_drmaa (for 2.x). #304
  • Include 2019 in the license file. #311
  • Note the notebook runs on Python 3.7.1. #312
  • Use frames type for Dask Array in roll_frames. #317
  • Refactor registration functions. #318
  • Refactor Bokeh visualization functions. #319
  • Final backports for 2.x. #320

v2.12.8

06 Nov 08:47
792471d
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  • Use dask.distributed instead of distributed (for 2.x). #279
  • Fix registration shifts chunking (for 2.x). #283
  • Use Subresource Integrity in ROI Trace Plot (for 2.x). #285
  • Update Pako to 1.0.6 (for 2.x). #287

v2.12.7

04 Nov 03:15
e797a12
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  • Use Python 3.6.6 (for 2.x). #263
  • Have git ignore Dask graph files (for 2.x). #264
  • Fix typo in DistributedArrayStore.__setitem__ (for 2.x). #266
  • Handle dropped Joblib module in Distributed 1.24.0 (for 2.x). #273
  • Adjustments to image registration for Dask 0.20.0 (for 2.x). #274
  • Use new Bokeh selected.js_on_change event hook (for 2.x). #275
  • Use scheduler argument to set temporary Client (for 2.x). #276

v2.12.6

04 Sep 16:09
0e148d1
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  • Keep persisting the image stack minimum (backport to 2.x). #255
  • Use dask-image (for 2.x). #258

v2.12.5

29 Jun 06:40
a0a7812
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  • Various fixes for Dask 0.18.0 (backport to 2.x). #251
  • Use Dask Distributed dashboard with nbserverproxy (backport to 2.x). #253

v2.12.4

12 Jun 15:51
1311822
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  • Skip Distributed versions with _repr_html_. #238
  • Allow Distributed Dashboard access from other IPs. #240 #243
  • Improve DistributedArrayStore's __iter__ and __len__ implementations. #241 #244
  • Require dask-ml. #242 #245

v2.12.3

19 Apr 17:49
08a6e42
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  • Faster application of registration adjustments. #235

v2.12.2

07 Apr 01:18
0ac3810
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  • Remove Arrays in Groups before removing Groups. #232
  • Handle creation/deletion of Groups through Zarr. #233
  • Require dask-ndmorph. #234