New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Migrate to Nextclade v3 #69

Open

2 tasks done

joverlee521 opened this issue Oct 17, 2024 · 0 comments · May be fixed by #70

Open

2 tasks done

Migrate to Nextclade v3 #69

joverlee521 opened this issue Oct 17, 2024 · 0 comments · May be fixed by #70

Assignees

Labels

Contributor

joverlee521 commented Oct 17, 2024 •

edited

Loading

Migration to Nextclade v3 guide for reference.

Ingest workflow was migrated in #54.

TODOs

verify/update nextclade input files in nextclade/rules/export.smk
update nextclade2 command in nextclade/build-configs/test-dataset/test_dataset.smk

joverlee521 added the enhancement label

joverlee521 self-assigned this

joverlee521 linked a pull request

that will close this issue

Update nextclade workflow docs for v3 #70

Open

1 task

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment