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Update Dockerfile
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niemasd authored Apr 15, 2024
1 parent b198b21 commit 32e1ee3
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ RUN apt-get update && apt-get -y upgrade && \
pip install --no-cache-dir biopython && \

# Install htslib
wget -qO- "https://github.com/samtools/htslib/releases/download/1.18/htslib-1.18.tar.bz2" | tar -xj && \
wget -qO- "https://github.com/samtools/htslib/releases/download/1.20/htslib-1.20.tar.bz2" | tar -xj && \
cd htslib-* && \
./configure && \
make && \
Expand Down Expand Up @@ -52,7 +52,7 @@ RUN apt-get update && apt-get -y upgrade && \
rm -rf hisat2-* && \

# Install Minimap2
wget -qO- "https://github.com/lh3/minimap2/archive/refs/tags/v2.27.tar.gz" | tar -zx && \
wget -qO- "https://github.com/lh3/minimap2/archive/refs/tags/v2.28.tar.gz" | tar -zx && \
cd minimap2-* && \
make && \
chmod a+x minimap2 && \
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