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Update README.md
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niemasd authored Oct 2, 2023
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Expand Up @@ -12,6 +12,12 @@ chmod a+x ViralMSA.py
sudo mv ViralMSA.py /usr/local/bin/ViralMSA.py # optional step to install globally
```

If you already have ViralMSA installed, you can update it to the newest release version easily:

```bash
ViralMSA.py -u
```

ViralMSA also requires at least one of the following tools to perform the alignment:

* **[Minimap2](https://github.com/lh3/minimap2) (used by default; strongly recommended)**
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