Genometric

All

19 repositories

MSPC
Public
Using combined evidence from replicates to evaluate ChIP-seq peaks
next-generation-sequencing peak genome-analysis ngs-analysis analysis chip-seq peaks enriched-regions overlapping-peaks mspc
C#
•
GNU General Public License v3.0
•10•20•3•0•Updated Dec 17, 2024Dec 17, 2024
gatk-sv
Public
Python
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BSD 3-Clause "New" or "Revised" License
•71•0•0•2•Updated Nov 12, 2024Nov 12, 2024
hello-world-javascript-action
Public
JavaScript
•1•0•0•0•Updated Jul 12, 2024Jul 12, 2024
test-action
Public
0•0•0•0•Updated Jun 3, 2024Jun 3, 2024
gatk-sv-dockstore
Public
A structural variation pipeline for short-read sequencing
Python
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BSD 3-Clause "New" or "Revised" License
•71•0•0•0•Updated Nov 6, 2023Nov 6, 2023
rmspc
Public
R
•0•0•0•0•Updated Dec 27, 2022Dec 27, 2022
TVQ
Public
Contains scripts to study the impact of publishing software to package management systems on their scholarly recognition.
citation toolshed bioconductor bioconda biotools scholarly-references
C#
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MIT License
•1•1•0•4•Updated Dec 8, 2022Dec 8, 2022
BibitemParser
Public
Parses a LaTeX BibTeX bibitem to a C# object
parser latex bibtex bibliography bibtexparser bibtex-entry
C#
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MIT License
•4•4•0•0•Updated Feb 23, 2021Feb 23, 2021
GeUtilities
Public
Genome Utilities (GeUtilities) provides open-source building-blocks for genomic data analysis tools.
parser genomics genome-analysis building-block
C#
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GNU General Public License v3.0
•2•4•3•2•Updated Jun 2, 2020Jun 2, 2020
Annotations
Public
MIT License
•0•0•0•0•Updated Nov 30, 2019Nov 30, 2019
mspc_validation
Public
Python
•2•3•0•0•Updated Nov 28, 2019Nov 28, 2019
content
Public
Experimental repo of bio.tools content for augmentation with other sources of tool information
29•1•0•0•Updated Nov 26, 2019Nov 26, 2019
Di4
Public
1D intervals incremental inverted index
genomics inverted-index spatial-index indexing-engine temporal-data genomics-search ngs-data indexing-querying chip-seq-data di4
C#
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GNU General Public License v3.0
•2•3•0•0•Updated Jul 29, 2019Jul 29, 2019
MatrixToBeds
Public
C#
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Apache License 2.0
•0•0•0•0•Updated Jan 9, 2019Jan 9, 2019
Di4-legacy
Public archive
1D intervals incremental inverted index
Python
•
GNU General Public License v3.0
•0•0•0•0•Updated Jul 18, 2018Jul 18, 2018
CloudAuthz
Public
Implements means of authorization delegation on cloud-based resource providers without sharing credentials
Python
•
GNU General Public License v3.0
•1•0•0•0•Updated Feb 15, 2018Feb 15, 2018
GeMSE
Public
GenoMetric Space Explorer
visualization clustering pattern-recognition genome-analysis
Java
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GNU General Public License v3.0
•2•2•0•0•Updated Dec 24, 2017Dec 24, 2017
MuSERA
Public
MuSERA: Multiple Sample Enriched Region Assessment
C#
•
GNU General Public License v3.0
•0•0•0•0•Updated Jul 26, 2017Jul 26, 2017
SimDataGen
Public
C#
•
GNU General Public License v3.0
•0•1•0•0•Updated Jul 16, 2017Jul 16, 2017