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- A Snakemake pipeline to find SARS-CoV-2 clusters in a reference phylogeny and estimate their transmission fitness
CrossInfectMTB
Publictcfinder
PublicA lightweight tool to find clusters of samples within a phylogeny.misb_training_2024
Public- A Snakemake workflow for SARS-CoV-2 Viral Intra-Patient Evolution Reporting and Analysis
- R Color package for Mycobacterium tuberculosis complex
getNCBImetadata
Public