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    57 repositories

    • Azrael

      Public
      R
      •0•0•0•0•Updated Oct 19, 2024Oct 19, 2024

    • Ped_SkM_Cell_Atlas

      Public
      Pipelines and analysis code for CZI funded Pediatric Cell Atlas of Skeletal Muscle Project
      R
      •0•0•0•0•Updated Sep 3, 2024Sep 3, 2024

    • Gargamel

      Public
      Saturation Mutagenesis-Reinforced Functional Assays (SMuRF) data workflow and analysis
      Python
      •0•0•0•0•Updated Aug 15, 2024Aug 15, 2024

    • Balthazar

      Public
      Python
      •0•0•0•0•Updated Aug 15, 2024Aug 15, 2024

    • mitochondrial_constraint

      Public
      Python
      •
      MIT License
      •3•5•0•0•Updated Aug 9, 2024Aug 9, 2024

    • napari-genome-viz

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated Jun 11, 2024Jun 11, 2024

    • PKD_portal

      Public
      JavaScript
      •0•0•0•7•Updated May 16, 2024May 16, 2024

    • seqr

      Public
      web-based analysis tool for rare disease genomics
      Python
      •
      GNU Affero General Public License v3.0
      •89•0•0•0•Updated Feb 14, 2024Feb 14, 2024

    • hail

      Public
      Cloud-native genomic dataframes and batch computing
      Python
      •
      MIT License
      •246•0•0•0•Updated Sep 3, 2023Sep 3, 2023

    • bch_emr

      Public
      AWS EMR for BCH environment
      Shell
      •0•0•0•0•Updated Aug 30, 2023Aug 30, 2023

    • DMD_projects_KM

      Public
      0•0•0•0•Updated Aug 18, 2023Aug 18, 2023

    • pkd_browser

      Public
      JavaScript
      •
      MIT License
      •0•1•0•0•Updated Jul 20, 2023Jul 20, 2023

    • sfari_browser

      Public
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Jun 1, 2023Jun 1, 2023

    • pkd_hail

      Public
      Python
      •0•0•0•0•Updated May 29, 2023May 29, 2023

    • czi_skeletal_muscle_cell_atlas

      Public
      Python
      •1•2•0•0•Updated Mar 8, 2023Mar 8, 2023

    • sfari-readviz

      Public
      WDL
      •0•0•0•0•Updated Feb 2, 2023Feb 2, 2023

    • sfari_hail

      Public
      Python
      •1•1•0•0•Updated Nov 9, 2022Nov 9, 2022

    • yubikey_duo

      Public
      0•0•0•0•Updated Oct 1, 2022Oct 1, 2022

    • LAMA2-CMD_prevalence

      Public
      Python
      •0•0•0•0•Updated Jul 7, 2022Jul 7, 2022

    • mito_visualize

      Public
      JavaScript
      •2•5•0•0•Updated May 25, 2022May 25, 2022

    • pcgc_wdl_workflows

      Public
      WDL
      •0•0•0•0•Updated Apr 25, 2022Apr 25, 2022

    • chopchop_mods

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Mar 27, 2022Mar 27, 2022

    • ACC_pipeline_evaluation

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Mar 3, 2022Mar 3, 2022

    • seqr_bch_instance

      Public
      Extra files, notes and configuration to get working on BCH/AWS network
      Python
      •0•0•0•0•Updated Jan 5, 2022Jan 5, 2022

    • CRD_Genomes

      Public
      WDL
      •0•0•0•0•Updated Oct 13, 2021Oct 13, 2021

    • mvd_analysis

      Public
      WDL
      •1•0•0•1•Updated Sep 23, 2021Sep 23, 2021

    • spark_on_slurm

      Public
      Shell
      •0•0•0•0•Updated Sep 1, 2021Sep 1, 2021

    • gnomad-readviz

      Public
      scripts that precompute minibams and other files necessary for the readviz feature of https://gnomad.broadinstitute.org
      Python
      •
      MIT License
      •1•0•0•0•Updated Aug 5, 2021Aug 5, 2021

    • generations_browser

      Public
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Jul 28, 2021Jul 28, 2021

    • sfari_mito_calling

      Public
      Python
      •2•0•0•0•Updated Jul 22, 2021Jul 22, 2021