gSoup

gSoup: An R package to perform various genetic analyses

Piyal Karunarathne

I wrote this package to assemble all essential bioinformatic tools in one place because I was tired of having to switch between different platforms to perform basic (and advance) population genetics and molecular evolution analyses. Whatever I find useful I will add to the package; hence it’s a SOUP. If you have any tools, analyses, plottings, or anyother tool you like to use in R, let me know. I will add it. Let’s make this an ALL-IN-ONE package.

Here is a plot I created with the package.

A tutorial of functions in the package will be up soon

Installation

• NOT AVAILABLE ON CRAN YET

• You can install the development version of gSoup from GitHub with:

    if (!requireNamespace("devtools", quietly = TRUE)) 
        install.packages("devtools") 
    devtools::install_github("piyalkarum/gSoup", build_vignettes = FALSE)