Packaged with piranha v1.3.1: https://github.com/polio-nanopore/piranha/releases/tag/1.3.1
Installation on Mac
For the Mac version, download the PiranhaGUIv1.6.0_macos.zip file extract it and drag the piranhaGUIv1.6.0.app icon into your Applications folder.
The first time you run it, right-click or control-click on the icon and select Open - this will the allow you to agree to run it. After this, you just need to double-click the icon.
It also requires you to install Docker Desktop from https://www.docker.com/products/docker-desktop/
You may also need to select the Allow the default Docker socket to be used option from Docker Desktop settings (under Advanced).
Installation on Linux
To install on Linux download the Debian/Ubuntu compatible .deb package. It can installed using Ubuntu's built-in application installer GUI, or by running:
sudo apt install /path/to/file/piranhaGUI_1.6.0.deb
Installation on Windows
Download the Windows installer and double click to run the installer.
Release Notes
- Added progress bar while piranha is running
- User will now be notified when a new version of piranhaGUI is available
- User will now be notified if using piranha image is a version incompatible with this version of piranhaGUI
- Reworked run editing to include run name, user, institute, notes
- Added ability to read in excel samples and pre-fill fields as specified from excel template
- Will now search for reads directory and set run name based on directory names
- Added detection of correct column for barcode, sample in samples css/excel
- Other fields in samples csv/excel are now passed on to piranha
- Language selected for the GUI is now also used for report
- Added persistent options for piranha in addition to temporary options
- Added greying out buttons to make interface more intuitive
Full Changelog: v1.5.3...1.6.0