240 review nncell and nncombinatorial models + Fixed SAN bugs #30
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: "Testing Tutorials" | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [main,github-actions-test] | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'README.md' | |
| - 'LICENSE.txt' | |
| - '.gitignore' | |
| pull_request: | |
| branches: [main] | |
| paths-ignore: | |
| - 'docs/**' | |
| - 'README.md' | |
| - 'LICENSE.txt' | |
| - '.gitignore' | |
| # Disable debugger's warnings from nbconvert in test_tutorials.py | |
| env: | |
| PYDEVD_DISABLE_FILE_VALIDATION: 1 | |
| jobs: | |
| simplicial-pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11"] | |
| torch-version: [2.0.1] | |
| include: | |
| - torch-version: 2.0.1 | |
| test-group: [1, 2, 3, 4] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install PyTorch ${{ matrix.torch-version }}+cpu | |
| run: | | |
| pip install --upgrade pip setuptools wheel | |
| pip install torch==${{ matrix.torch-version}} --extra-index-url https://download.pytorch.org/whl/cpu | |
| pip install torch-scatter -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-sparse -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-cluster -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| - name: Install main package | |
| run: | | |
| pip install -e .[all] | |
| - name: Run tests for tutorials on simplicial domain [pytest] [Group-${{ matrix.test-group}}] | |
| run: | | |
| pytest --splits 4 --group ${{ matrix.test-group}} test/tutorials/test_simplicial.py | |
| hypergraph-pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11"] | |
| torch-version: [2.0.1] | |
| include: | |
| - torch-version: 2.0.1 | |
| test-group: [1, 2, 3] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install PyTorch ${{ matrix.torch-version }}+cpu | |
| run: | | |
| pip install --upgrade pip setuptools wheel | |
| pip install torch==${{ matrix.torch-version}} --extra-index-url https://download.pytorch.org/whl/cpu | |
| pip install torch-scatter -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-sparse -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-cluster -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| - name: Install main package | |
| run: | | |
| pip install -e .[all] | |
| - name: Run tests for tutorials on hypergraph domain [pytest] [Group-${{ matrix.test-group}}] | |
| run: | | |
| pytest --splits 3 --group ${{ matrix.test-group}} test/tutorials/test_hypergraph.py | |
| cell-pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11"] | |
| torch-version: [2.0.1] | |
| include: | |
| - torch-version: 2.0.1 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install PyTorch ${{ matrix.torch-version }}+cpu | |
| run: | | |
| pip install --upgrade pip setuptools wheel | |
| pip install torch==${{ matrix.torch-version}} --extra-index-url https://download.pytorch.org/whl/cpu | |
| pip install torch-scatter -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-sparse -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-cluster -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| - name: Install main package | |
| run: | | |
| pip install -e .[all] | |
| - name: Run tests for tutorials on cell domains [pytest] | |
| run: | | |
| pytest test/tutorials/test_cell.py | |
| combinatorial-pytest: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ["3.10", "3.11"] | |
| torch-version: [2.0.1] | |
| include: | |
| - torch-version: 2.0.1 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: "pip" | |
| cache-dependency-path: "pyproject.toml" | |
| - name: Install PyTorch ${{ matrix.torch-version }}+cpu | |
| run: | | |
| pip install --upgrade pip setuptools wheel | |
| pip install torch==${{ matrix.torch-version}} --extra-index-url https://download.pytorch.org/whl/cpu | |
| pip install torch-scatter -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-sparse -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| pip install torch-cluster -f https://data.pyg.org/whl/torch-${{ matrix.torch-version }}+cpu.html | |
| - name: Install main package | |
| run: | | |
| pip install -e .[all] | |
| - name: Run tests for tutorials on combinatorial domains [pytest] | |
| run: | | |
| pytest test/tutorials/test_combinatorial.py |