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Transcriptional Cancer Atlas Annotation

This repository contains files to build the Transcriptional Cancer Atlas annotation in Github Pages. See the latest version here.

If you are using this annotation data or related software, please cite:

F. Comitani, J. O. Nash, S. Cohen-Gogo, A. Chang, T. T. Wen, A. Maheshwari, B. Goyal, E. S. L. Tio, K. Tabatabaei, L. Brunga, J. E. G. Lawrence, P. Balogh, A. Flanagan, S. Teichmann, V. Ramaswamy, J. Hitzler, J. Wasserman, R. A. Gladdy, B. C. Dickson, U. Tabori, M. J. Cowley, S. Behjati, D. Malkin, A. Villani, M. S. Irwin and A. Shlien, "Multi-scale transcriptional clustering and heterogeneity analysis reveal diagnostic classes of childhood cancer" (under review).

This annotation is updated periodically, make sure to report the correct version you are using in your publication.

To compile a new version

make html in src folder then mv everything from docs/html into docs, commit, push and you are done!

Copyright ©2022 Federico Comitani, Josh O. Nash and Adam Shlien. RESEARCH USE ONLY: This website is intended for research purposes only. These analyses were not performed for the purposes of diagnosis, prophylaxis, or treatment.

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Annotation of the Transcriptional Atlas

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