Skip to content

Allow for nodes files to be either PDB or mmCIF #35

Allow for nodes files to be either PDB or mmCIF

Allow for nodes files to be either PDB or mmCIF #35

Workflow file for this run

name: build
on: [push, pull_request]
jobs:
build:
strategy:
fail-fast: false
matrix:
os: [ubuntu-22.04]
python-version: ['3.9', '3.10', '3.11', '3.12']
runs-on: ${{ matrix.os }}
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
pip install coverage scons flask flake8 bokeh ihm
git clone --depth=5 https://github.com/salilab/saliweb
export PYTHON=`pip show coverage |grep Location|cut -b11-`
(cd saliweb && scons modeller_key=UNKNOWN pythondir=$PYTHON perldir=~/perl prefix=~/usr webdir=~/www install && touch $PYTHON/saliweb/frontend/config.py)
rm -rf saliweb
- name: Test
run: |
scons coverage=true python=$(which python) test
flake8 .
python -m coverage combine && python -m coverage xml && python -m coverage erase
- uses: codecov/codecov-action@v4
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}