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Bump ipython from 8.12.2 to 8.12.3 #1520

Bump ipython from 8.12.2 to 8.12.3

Bump ipython from 8.12.2 to 8.12.3 #1520

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Test
on:
push:
branches: [master]
pull_request:
branches: [master]
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest, macOS-latest] # add windows-2019 when poetry allows installation with `-f` flag
python-version: ["3.8", "3.9", "3.10"]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Setup macOS
if: runner.os == 'macOS'
run: |
brew install libomp # https://github.com/pytorch/pytorch/issues/20030
- name: Setup macOS
if: runner.os == 'windows'
run: |
brew install libomp # https://github.com/pytorch/pytorch/issues/20030
- name: Get full Python version
id: full-python-version
shell: bash
run: echo ::set-output name=version::$(python -c "import sys; print('-'.join(str(v) for v in sys.version_info))")
- name: Install poetry
shell: bash
run: |
curl -sSL https://install.python-poetry.org | python3 -
- name: Set poetry path variable
run: echo "/Users/runner/.local/bin" >> $GITHUB_PATH
- name: Configure poetry
shell: bash
run: poetry config virtualenvs.in-project true
- name: Set up cache
uses: actions/cache@v2
id: cache
with:
path: .venv
key: venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('**/poetry.lock') }}
- name: Ensure cache is healthy
if: steps.cache.outputs.cache-hit == 'true'
shell: bash
run: poetry run pip --version >/dev/null 2>&1 || rm -rf .venv
- name: Upgrade pip
shell: bash
run: poetry run python -m pip install pip -U
- name: Install dependencies
shell: bash
run: poetry install -E "github-actions graph mqf2"
# - name: Install pytorch geometric dependencies
# shell: bash
# run: poetry run pip install pyg_lib torch-scatter torch-sparse torch-cluster torch-spline-conv torch-geometric -f https://data.pyg.org/whl/torch-2.0.0+cpu.html
- name: Run pytest
shell: bash
run: poetry run pytest tests
- name: Statistics
if: success()
run: |
pip install coverage
coverage report
coverage xml
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v1
if: always()
continue-on-error: true
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: coverage.xml
flags: cpu,pytest
name: CPU-coverage
fail_ci_if_error: false
docs:
name: Test docs build
runs-on: ubuntu-latest
steps:
- name: Check out Git repository
uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v1
with:
python-version: 3.8
- name: Cache pip
uses: actions/cache@v2
with:
path: ~/.cache/pip
key: ${{ runner.os }}-pip-${{ hashFiles('docs/requirements.txt') }}
restore-keys: |
${{ runner.os }}-pip-
- name: Install dependencies
run: |
sudo apt-get update && sudo apt-get install -y pandoc
python -m pip install --upgrade pip
pip install -r docs/requirements.txt
shell: bash
- name: Build sphinx documentation
run: |
cd docs
make clean
make html --debug --jobs 2 SPHINXOPTS="-W"
- name: Upload built docs
uses: actions/upload-artifact@v2
with:
name: docs-results-${{ runner.os }}-${{ matrix.python-version }}-${{ matrix.requires }}
path: docs/build/html/
# Use always() to always run this step to publish test results when there are test failures
if: success()