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updated README file
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sachinpundhir committed Oct 22, 2015
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Expand Up @@ -113,7 +113,7 @@ Example

An usage example of PARESuite is shown below. As input, the method requires mapped reads in BAM format. An example dataset and expected results are available at http://servers.binf.ku.dk/pare/download/test_run/

pare -i data/h3k4me1_helas3_Rep1.bam -j data/h3k4me1_helas3_Rep2.bam -k data/optimal.h3k4me1_helas3_Rep0_Vs_control_helas3_Rep0.regionPeak.gz -o results -m hg19 -p &> pare.log
pare -i data/h3k4me1_helas3_Rep1.bam -j data/h3k4me1_helas3_Rep2.bam -o results -m hg19 -p &> pare.log

Input
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