Convert between AnnData and SingleCellExperiment
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Dec 17, 2024 - Python
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rpy2
Here are 27 public repositories matching this topic...
Repository containing Jupyter Notebooks for most of the blog posts on my blog. For example, there are data visualization, data manipulation, and data analysis code examples in the Notebooks
data-visualization jupyter-notebooks anova rpy2 pandas-dataframe-tutorial repeated-measures-anova rpy2-tutorial
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Jul 13, 2023 - Jupyter Notebook
Python Channel Attribution (pychattr) - A Python implementation of the excellent R ChannelAttribution library
python wrapper data-science machine-learning data-analysis rpy2 channel-attribution python-channel-attribution
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Sep 5, 2022 - Python
Running rpy2 in Docker containers
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Dec 29, 2023 - Shell
Share Apache Arrow datasets between Python and R.
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Nov 30, 2024 - Python
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.
python data-science bioinformatics rna-seq r numpy gene-expression pandas python3 scipy rna-seq-analysis bioinformatics-analysis snvs rpy2 bioinformatics-tool matrixeqtl
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Jan 20, 2022 - Python
PROFILE RNA-seq binarization technique.
bioinformatics computational-biology pandas python3 rna-seq-analysis binarization single-cell-rna-seq normalisation rpy2
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May 23, 2022 - Python
Instant Data Report using R packages 'DataExplorer' in Python
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Dec 11, 2019 - HTML
COVID 19 state wise + India + International prediction with data visualization and live curve prediction
python machine-learning r spark jupyter-notebook data-visualization data-analysis jupyter-notebooks bayesian-statistics kalman-filter fbprophet rpy2 googlecolab coronavirus coronavirus-tracking covid19
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Apr 30, 2020 - Python
This repository contains all codes necessary to reproduce figures and results reported in Stein, Barbosa et al. (Nature Communications, 2020) from the raw data acquired in human behavioral experiments (data included in the repository), and from the relevant model simulations.
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Aug 31, 2020 - Python
Graphical user interface allows easy access to the multiscale model-free idealization methods in the R-package clampSeg (https://cran.r-project.org/package=clampSeg). It supports the model-free segmentation methods JSMURF (https://ieeexplore.ieee.org/document/6655999), JULES (https://ieeexplore.ieee.org/document/8374882) and HILDE (https://arxiv…
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Jan 27, 2022 - Python
Algorithm in python to determine how many people had stroke by age using linear regression
python data-science machine-learning statistics linear-regression regression data-analysis confidence-intervals regression-analysis confidence rpy2
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Apr 21, 2023 - Jupyter Notebook
Python and R scripts written to perform some cleaning work on a dataset of Smithsonian Trinomials taken from American Antiquity issues ranging from 2004 to 2013.
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Oct 5, 2017 - Python
NBA Player of the Week Visualizations using ggplot
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Oct 13, 2019 - HTML
Use R snippets as python functions. Manage R dependencies separately.
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Feb 27, 2024 - Python
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