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API documents

Detailed documents of API functions in source code folders.

spaVAE for spatially resolved transcriptomics (SRT).
spaVAE_Batch for integrating SRT data from different batches.
spaPeakVAE for spatial ATAC-seq.
spaLDVAE for prioritize spatially variable genes in SRT, or peaks in spatial ATAC-seq.
spaMultiVAE for spatial multi-omics, which profiles RNA and surface proteins (ADT) simultaneously.

src/spaVAE

src/spaVAE_Batch

src/spaPeakVAE

src/spaLDVAE

src/spaMultiVAE