Adaptive Truncation Table Generator

• comp_Z_iterations.py, has dependency:
  • utils/utils.py: function logdiffexp;
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/sequential_mp.py: The Sequential approach with brute force and mpmath structure;
  • src/fixed_mp.py: Evaluate a fixed numbers of terms
  • stan/comp_Z_brms_fixed.stan: The COM-Poisson normalising constant by brms with index error corrected and M increased from 10^4 to 10^6;

Run (check if auxiliary libraries are installed):

python comp_Z_iterations.py

• comp_Z_errors.py, has dependency:
  • utils/utils.py: function logdiffexp;
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/sequential_mp.py: The Sequential approach with brute force and mpmath structure;
  • src/fixed_mp.py: Evaluate a fixed numbers of terms
  • stan/comp_Z_brms_fixed.stan: The COM-Poisson normalising constant by brms with index error corrected and M increased from 10^4 to 10^6;

Run (check if auxiliary libraries are installed):

python comp_Z_errors.py

• domination_bp_over_stt.py, has dependency:
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/sum_to_threshold_mp.py: The Sum-to-threshold approach with mpmath structure;

Run:

python domination_bp_over_stt.py

• comp_Z_approx_vs_bounding.py, has dependency:
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/fixed_mp.py: Evaluate a fixed numbers of terms

Run:

python comp_Z_approx_vs_bounding.py

• p_series_iterations.py, has dependency:
  • src/integration_bound_mp.py: The Bounding pairs with integral test approach with mpmath structure;
  • src/sequential_mp.py: The Sequential approach with brute force and mpmath structure;

Run:

python p_series_iterations.py

• Table of mcmc (made in https://github.com/wellington36/MCMC_COMPoisson)

• poisson_factorial_ratio.py, has dependency:
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/sum_to_threshold_mp.py: The Sum-to-threshold approach with mpmath structure;
  • src/fixed_mp.py: Evaluate a fixed numbers of terms

Run:

python poisson_factorial_ratio.py

• negative_binomial_model.py, has dependency:
  • src/bounding_pairs_mp.py: The Bounding pairs approach with mpmath structure;
  • src/sum_to_threshold_mp.py: The Sum-to-threshold approach with mpmath structure;
  • src/fixed_mp.py: Evaluate a fixed numbers of terms

Run:

python negative_binomial_model.py