add proteins to base_columns

wilhelm-lab · Oct 10, 2024 · 5d8efd3 · 5d8efd3
1 parent ad4981a
commit 5d8efd3
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Showing 8 changed files with 10 additions and 9 deletions.
diff --git a/.cookietemple.yml b/.cookietemple.yml
@@ -15,5 +15,5 @@ full_name: Victor Giurcoiu
 email: victor.giurcoiu@tum.de
 project_name: spectrum_fundamentals
 project_short_description: Fundamentals public repo
-version: 0.7.6
+version: 0.7.7
 license: MIT
diff --git a/.github/release-drafter.yml b/.github/release-drafter.yml
@@ -1,5 +1,5 @@
-name-template: "0.7.6 " # <<COOKIETEMPLE_FORCE_BUMP>>
-tag-template: 0.7.6 # <<COOKIETEMPLE_FORCE_BUMP>>
+name-template: "0.7.7 " # <<COOKIETEMPLE_FORCE_BUMP>>
+tag-template: 0.7.7 # <<COOKIETEMPLE_FORCE_BUMP>>
 exclude-labels:
     - "skip-changelog"
 

diff --git a/cookietemple.cfg b/cookietemple.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.7.6
+current_version = 0.7.7
 
 [bumpversion_files_whitelisted]
 init_file = spectrum_fundamentals/__init__.py

diff --git a/docs/conf.py b/docs/conf.py
@@ -52,9 +52,9 @@
 # the built documents.
 #
 # The short X.Y version.
-version = "0.7.6"
+version = "0.7.7"
 # The full version, including alpha/beta/rc tags.
-release = "0.7.6"
+release = "0.7.7"
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "spectrum_fundamentals"
-version = "0.7.6"  # <<COOKIETEMPLE_FORCE_BUMP>>
+version = "0.7.7"  # <<COOKIETEMPLE_FORCE_BUMP>>
 description = "Fundamental functions, annotation pipeline and constants for oktoberfest"
 authors = ["Wilhelmlab at Technical University of Munich"]
 license = "MIT"

diff --git a/spectrum_fundamentals/__init__.py b/spectrum_fundamentals/__init__.py
@@ -5,7 +5,7 @@
 __author__ = """The Oktoberfest development team (Wilhelmlab at Technical University of Munich)"""
 __copyright__ = f"Copyright {datetime.now():%Y}, Wilhelmlab at Technical University of Munich"
 __license__ = "MIT"
-__version__ = "0.7.6"
+__version__ = "0.7.7"
 
 import logging
 import logging.handlers

diff --git a/spectrum_fundamentals/__main__.py b/spectrum_fundamentals/__main__.py
@@ -5,7 +5,7 @@
 
 
 @click.command()
-@click.version_option(version="0.7.6", message=click.style("spectrum_fundamentals Version: 0.7.6"))
+@click.version_option(version="0.7.7", message=click.style("spectrum_fundamentals Version: 0.7.7"))
 def main() -> None:
     """spectrum_fundamentals."""
 

diff --git a/spectrum_fundamentals/metrics/percolator.py b/spectrum_fundamentals/metrics/percolator.py
@@ -94,6 +94,7 @@ def __init__(
             "mass_analyzer",
             "mz_range",
             "collision_energy",
+            "proteins",
         ]
 
         super().__init__(pred_intensities, true_intensities, mz)