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[FIX] fix octave create roi #11

[FIX] fix octave create roi

[FIX] fix octave create roi #11

---
name: tests and coverage with octave
env:
OCTFLAGS: --no-gui --no-window-system --silent
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
on:
push:
branches:
- main
pull_request:
branches: ['*']
schedule:
- cron: 0 0 1 * *
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
jobs:
tests_octave:
runs-on: ubuntu-latest
steps:
- name: Install CPP_ROI
uses: actions/checkout@v4
with:
submodules: true
fetch-depth: 0
- name: Install SPM
run: |
git clone https://github.com/spm/spm12.git --depth 1
- name: Install Moxunit and MOcov
run: |
git clone https://github.com/MOxUnit/MOxUnit.git --depth 1
git clone https://github.com/MOcov/MOcov.git --depth 1
- name: Install octave
run: |
sudo apt-get -y -qq update
sudo apt-get -y install \
octave \
liboctave-dev\
octave-common \
octave-io \
octave-image \
octave-signal \
octave-statistics
make -C MOxUnit install
make -C MOcov install
- name: Compile SPM
run: |
make -C spm12/src PLATFORM=octave distclean
make -C spm12/src PLATFORM=octave
make -C spm12/src PLATFORM=octave install
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'spm12')); savepath();"
- name: Add bids-matlab
run: make install_dev
- name: Run tests
run: |
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'tests', 'utils')); savepath();"
octave $OCTFLAGS --eval "cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run tests_octave;"
- name: Code coverage
uses: codecov/codecov-action@v4
with:
file: coverage.xml
flags: octave
name: codecov-umbrella
fail_ci_if_error: false