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Menche Lab

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  1. VRNetzer VRNetzer Public

    A Virtual Reality platform for interactive, immersive network exploration.

    34 3

  2. CartoGRAPHs CartoGRAPHs Public

    HTML 22 3

  3. MultiOme MultiOme Public

    Network-based project to explore gene connectivity through biological scales

    HTML 20 5

  4. BioProfiling.jl BioProfiling.jl Public

    A flexible Julia toolkit for high-dimensional cellular profiles

    Julia 13 1

  5. DataDiVR_WebApp DataDiVR_WebApp Public

    JavaScript 9 4

  6. Perturbome Perturbome Public

    Code to reproduce the study: Mapping the perturbome network of cellular perturbations.

    Jupyter Notebook 8 6

Repositories

Showing 10 of 43 repositories
  • DataDiVR_WebApp Public
    menchelab/DataDiVR_WebApp’s past year of commit activity
    JavaScript 9 MIT 4 18 0 Updated Oct 18, 2024
  • sctools Public

    Collection of helper functions to make large scale single cell analysis more bearable

    menchelab/sctools’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 18, 2024
  • Neuwirth_Malzl_et_al_2024 Public

    Code repository for all analyses shown in Neuwirth and Malzl et al. 2024

    menchelab/Neuwirth_Malzl_et_al_2024’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 4, 2024
  • Exposome Public template

    This repository will contain the analyses for the human exposure network paper

    menchelab/Exposome’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 17, 2024
  • mutsigintsKit Public

    Functions for the mutsigints project.

    menchelab/mutsigintsKit’s past year of commit activity
    R 0 0 0 0 Updated Sep 15, 2024
  • mutsigints Public

    Interactions of mutational signatures and cancer states

    menchelab/mutsigints’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 22, 2024
  • SA_bone_marrow Public

    scRNA-seq analysis of the Radhouani et al.

    menchelab/SA_bone_marrow’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 20, 2024
  • Grundtner_et_al_2024 Public

    All the code used for data analysis with MEFISTO

    menchelab/Grundtner_et_al_2024’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 18, 2024
  • apobex Public
    menchelab/apobex’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 10, 2024
  • CartoGRAPHs Public
    menchelab/CartoGRAPHs’s past year of commit activity
    HTML 22 MIT 3 1 0 Updated May 16, 2024
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