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genpat-dashboard

GenPat-Dashboard web application (still under development)

Install

This is a pure javascript client application, easy to install and deploy in your own environment. Follow these steps:

  • Clone the repo in your local working directory

    git clone https://github.com/genpat-it/genpat-dashboard.git
    

    alternativelly, you can simply download the repo as a zip archive and unzip it

  • Cd to your working directory and install the packages from the package.json

    npm install
    
  • Run the build npm script to consolidate test data

    npm run build
    

Run the demo

Accepted parameters

  • geo: path to geojson point collection
  • tree: path to phylogenetic tree in nwk format
  • treetitle: a name for the tree
  • fasta: path to fasta file (it will be represented using the integrated MSA viewer)
  • meta: path to metadata table in json format

Dashboard view

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GenPat-Dashboard web application

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  • JavaScript 63.4%
  • HTML 22.1%
  • SCSS 14.5%