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fix: Add --cores to gh actions nextstrain build
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This is required for the action to be compatible with snakemake version >5.11.0
which started to require the `--cores` option

For more context see:
- nextstrain/cli#272 
- https://bedfordlab.slack.com/archives/C01LCTT7JNN/p1681324279363569?thread_ts=1681293140.124269&cid=C01LCTT7JNN
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corneliusroemer authored Apr 12, 2023
1 parent 56ff0e4 commit bc036ee
Showing 1 changed file with 1 addition and 0 deletions.
1 change: 1 addition & 0 deletions .github/workflows/run-models.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -71,4 +71,5 @@ jobs:
envdir env.d snakemake \
--configfile config/config.yaml optional.yaml \
--printshellcmds \
--cores 8 \
"${override_config[@]}"

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