1.18.0

What's Changed

Bugfixes 🪲

• Remove mandatory requirement of run_id during parsing of nf-core datasets by @Steffengreiner in #132

Others 🧃

• Bump actions/github-script from 6 to 7 by @dependabot in #133
• Release 1.18.0 by @Steffengreiner in #134

Full Changelog: 1.17.0...1.18.0

1.17.0

What's Changed

New Features 🚀

• allow maxquant data containing the 'combined' subfolder by @wow-such-code in #129

Others 🧃

• Release 1.17.0 by @wow-such-code in #130

Full Changelog: 1.16.0...1.17.0

1.16.0

What's Changed

New Features 🚀

Enable NanoporeParser to validate and parse pod5 based nanopore structures (#126)

Documentation & CI 🪂

• Update GitHub Actions by @KochTobi in #124

Others 🧃

• Bump actions/checkout from 3 to 4 by @dependabot in #125

Full Changelog: 1.15.0...1.16.0

1.15.0

What's Changed

New Features 🚀

• Adapt Nanoporeparser to check if minimal required files were provided by @Steffengreiner in #121

Full Changelog: 1.14.1...1.15.0

1.14.1

What's Changed

New Features 🚀

• fix/increase data model version by @wow-such-code in #118

Full Changelog: 1.14.0...1.14.1

1.14.0

What's Changed

New Features 🚀

• Adapt NanoporeParser to allow second basecalling folder by @Steffengreiner in #115

Documentation & CI 🪂

• increase to 1.13.0-snapshot by @wow-such-code in #114

Others 🧃

• Release 1.14.0 by @Steffengreiner in #116

Full Changelog: 1.13.0...1.14.0

1.13.0

What's Changed

New Features 🚀

• delete hidden files if and only if nanopore validation is successful by @wow-such-code in #111

Others 🧃

• Update dev to release 1.12.1 by @Steffengreiner in #107
• Merge 1.12.2 to Dev by @Steffengreiner in #110
• Prepare release 1.13.0 by @wow-such-code in #112

Full Changelog: 1.12.2...1.13.0

1.12.2

What's Changed

Bugfixes 🪲

• Adapt parsing of execution report to new regex by @Steffengreiner in #108

Full Changelog: 1.12.1...1.12.2

1.12.1

What's Changed

Fixed

• Update NF-Core Parser to use new NF-Core output by @Steffengreiner in #104

Full Changelog: 1.12.0...1.12.1

1.12.0

What's Changed

New Features 🚀

• Feature/update nanopore by @wow-such-code in #91
• Feature/dm 343 new maxquant model by @wow-such-code in #101

Others 🧃

• Sync Release 1.9.0 by @sven1103 in #64
• Sync with hotfix 1.9.1 by @sven1103 in #67
• Sync with hotfix 1.9.2 by @sven1103 in #69
• Update maxquant file parser by @jenniferboedker in #74
• Sync with hotfix 1.9.3 by @sven1103 in #73
• Sync Hotfix/1.10.3 by @Steffengreiner in #84
• Sync Hotfix/1.10.4 to dev by @Steffengreiner in #88
• Include groovydoc plugin in pom.xml to enable report generation by @Steffengreiner in #59
• Sync PR by @jenniferboedker in #92
• Feature/update nanopore by @wow-such-code in #97
• merge release into dev by @wow-such-code in #100
• Prepare version 1.12.0 by @wow-such-code in #102

Full Changelog: 1.11.0...1.12.0