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[python] Geometry DataFrame#3297

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XanthosXanthopoulos wants to merge 14 commits intoxan/hide_internal_dimssingle-cell-data/TileDB-SOMA:xan/hide_internal_dimsfrom xan/python_geometry_dataframesingle-cell-data/TileDB-SOMA:xan/python_geometry_dataframeCopy head branch name to clipboard

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Commits

Commits on Oct 24, 2024

• Geometry dataframe implementation, use spatial axes when available when creating schema

  XanthosXanthopoulos

  committed
  fa66ba2

• Address PR review comments

  XanthosXanthopoulos

  committed
  ead7104

• Add option for casting geometry data to WKB

  XanthosXanthopoulos

  committed
  b744e20

• Remove constant prefix name from SOMAGeometryDataFrame

  XanthosXanthopoulos

  committed
  928ccf2

Commits on Oct 25, 2024

• Change binary type buffer from uint8_t to std::byte (#3233)

  XanthosXanthopoulos

  authored
  ca6eb88

Commits on Oct 29, 2024

• Address PR comments

  XanthosXanthopoulos

  committed
  40a95f2

Commits on Oct 31, 2024

• Hide tiledb internal spatial columns and replace them with soma_geometry

  XanthosXanthopoulos

  committed
  5a0f5f5

• Change iteration order or attributes

  XanthosXanthopoulos

  committed
  fbac212

Commits on Nov 1, 2024

• Swap shared_ptr with const reference, hide internal columns when opening an array for read unless explicity specify them

  XanthosXanthopoulos

  committed
  eb47db2

• Change the way to obtain attributes and dimensions

  XanthosXanthopoulos

  committed
  0ccae7e

• Move internal dimension filtering to ManagedQuery

  XanthosXanthopoulos

  committed
  d6276c5

• Geometry dataframe implementation allowing read and spatial region read operations

  XanthosXanthopoulos

  committed
  05314fb

Commits on Nov 6, 2024

• Add write implementation for Geometry DataFrame, filter internal tiledb keys

  XanthosXanthopoulos

  committed
  6de3420

• Update apis/python/src/tiledbsoma/_spatial_util.py

  Show description for c59ea75
  

  XanthosXanthopoulos

  and

  johnkerl

  authored
  c59ea75