A (mostly) universal methylation extractor for BS-seq experiments.
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Updated
Jun 21, 2024 - C
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bisulfite
Here are 8 public repositories matching this topic...
BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.
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Jul 5, 2019 - Python
Targeted Amplicon Bisulfite Sequencing Analysis Tool
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May 8, 2019 - Perl
bicycle (bisulfite-based methylcytosine caller) is a next-generation sequencing bioinformatics pipeline able to perform a full DNA methylation level analysis
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May 6, 2021 - Java
An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.
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Jan 31, 2024 - Python
CytoMeth tool compiles a set of open source software named in the Roche pipeline guidelines to perform SeqCap Epi data analysis.
ngs
methylation
epigenetics
bisulfite
rscript
cpg
cpg-islands
ngs-pipeline
cytometh-installation
cytometh-processing
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Apr 7, 2023 - R
Methylome transfer engine (mxe)
methylation
epigenetics
bisulfite
dna-methylation
wgbs
methyl-seq
epigenomics
bisulfite-sequencing
methylation-analysis
methylome
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Nov 27, 2024 - C++
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