A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from cell phenotypes.
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Feb 22, 2024 - Python
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multiplexed-imaging-analysis
Here are 6 public repositories matching this topic...
HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇
image-processing
proteomics
phenotyping
multichannel
single-cell
spatial-data-analysis
ome-tiff
cell-segmentation
whole-slide-imaging
proteomics-data-analysis
digital-slide-archive
cell-cell-interaction
multiplexed-imaging
multiplexed-imaging-analysis
mibiscope
spatial-biology
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Feb 29, 2024 - JavaScript
Maximum Entropy Based HI-C/Distance Map - Polymer Physics - Structures Method
fish
hi-c
maximum-entropy-model
multiplexed-imaging-analysis
chromosome-reconstruction
chromosome-organization
maximum-entropy-principle
maximum-entropy-distribution
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Aug 6, 2024 - Jupyter Notebook
Computational pipeline for multiplexed analysis of tumors.
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Sep 12, 2021 - Jupyter Notebook
Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry
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Jul 10, 2024 - Jupyter Notebook
Rapid and efficient image preprocessing pipeline for multiplexed spatial proteomics. Code to compare several techniques to denoise Imaging Mass cytometry
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Updated
Oct 8, 2024 - Jupyter Notebook
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