Skip to content

Issues: scverse/muon

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

38 Open 72 Closed
38 Open 72 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

random_state=0 does not set seed in muon.tl.leiden, either a bug or unclear documentation bug Something isn't working
#154 opened Dec 12, 2024 by AKMHamid
Document how to make a release enhancement New feature or request
#153 opened Dec 10, 2024 by grst
Add trusted publishing enhancement New feature or request
#150 opened Oct 25, 2024 by flying-sheep
1 of 3 tasks
1
Discrete values after using the CLR normalization pt.pp.clr
#144 opened Jun 27, 2024 by LucHendriks
WNN integration raise error while adding connectivities into mdata.obsp bug Something isn't working
#142 opened May 28, 2024 by 5tinzi
Invalid function call in independent component analysis (tl.ica) bug Something isn't working
#139 opened Apr 12, 2024 by pavanvidem
Test against pre-releases enhancement New feature or request
#138 opened Apr 9, 2024 by ivirshup
Improve module import time enhancement New feature or request
#137 opened Mar 29, 2024 by rpadmanabhan
1
Add fragment file path to a merged mudata object enhancement New feature or request
#133 opened Mar 8, 2024 by jolvhull v0.2.0
1
dsb normalization results do not replicate results with the original DSBNormalizeProtein function in R bug Something isn't working
#131 opened Mar 1, 2024 by javier-marchena-hurtado
float overflow in dsb normalization bug Something isn't working
#130 opened Mar 1, 2024 by javier-marchena-hurtado
1
ValueError: could not broadcast input array from shape bug Something isn't working question Further information is requested
#128 opened Nov 27, 2023 by wariobrega
3
Sum duplicate rows in muon.atac.tl.count_fragments_features enhancement New feature or request
#125 opened Aug 31, 2023 by benjamin-james
Enable gene_symbols argument in mu.pl.embedding enhancement New feature or request
#124 opened Aug 30, 2023 by racng
1
Batch correction for joint modality umap enhancement New feature or request
#123 opened Aug 23, 2023 by GirayEryilmaz
MOFA error when data has been created using axis=-1
#122 opened Aug 23, 2023 by dawe
4
"OptionError: 'Pattern matched multiple keys'" traceback in tutorial bug Something isn't working
#119 opened Aug 4, 2023 by chris-rands
OSError: Unable to synchronously create attribute (object header message is too large)
#118 opened Aug 4, 2023 by zhouzhendiao
1
Negative values after pt.pp.dsb bug Something isn't working
#116 opened Jul 28, 2023 by ChaseTaylor939
1
MOFA on multiple groups with single view enhancement New feature or request
#113 opened Jun 25, 2023 by martinrohbeck
1
Count fragment function counts duplicates bug Something isn't working
#110 opened Jun 12, 2023 by lauradmartens v0.2.0
Adopt cookiecutter-scverse template enhancement New feature or request
#103 opened Apr 28, 2023 by grst v0.2.0
Make code that retrieves values from obs/X/layer/raw of the different modalities a public function enhancement New feature or request
#98 opened Mar 29, 2023 by grst
Broken link: tutorial for cell type annotation bug Something isn't working
#97 opened Mar 15, 2023 by yangjun9095
atac.pp.scopen fails while allocating a second array after computing scopen but before writing result to disk bug Something isn't working
#92 opened Feb 3, 2023 by alexlenail
4
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.