.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
-
Updated
Sep 9, 2024 - C#
.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
Used to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.
MASIC generates selected ion chromatograms (SICs) for all of the parent ions chosen for fragmentation in an LC-MS/MS analysis, characterizing the peak(s) in each SIC, computing peak statistics including elution time of the peak apex, peak area, and peak signal/noise. It can also extract reporter ion abundances (e.g. iTRAQ or TMT).
Examines a series of MS data files (or data directories) and extracts the acquisition start and end times, number of spectra, and the total size of the data. In addition, it can create 2D-plot graphics of the m/z values vs. time for QA purposes.
Extracts peak intensity data from each scan in a Thermo raw file, and writes that data to a tab-delimited text file.
Used to automatically detect and quantify partially labeled C13 peptides in a mass spectrometry dataset.
Add a description, image, and links to the ms-spectrum topic page so that developers can more easily learn about it.
To associate your repository with the ms-spectrum topic, visit your repo's landing page and select "manage topics."